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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015901476.1_cds_XP_016451499.1_45842
CDS Infomation

[gene=LOC107776162] [db_xref=GeneID:107776162] [protein=WD repeat-containing protein 48-like] [protein_id=XP_016451499.1] [location=complement(join(4549..4647,4939..5115,7377..7470,7715..8076,8882..9016,9091..9129,9302..9367,9488..9583,12450..12686,12777..12927,18113..18148,21701..21798,21901..22197,22342..22431,22546..22611,23028..23186,23481..23543))] [gbkey=CDS]
Sequence

ATGAACCAAAAAAAAAAAGTTCGTATGCCATGTTTCACATTTGGAGCTTCTGTTGGTGAA
GAGCATTATGCAGGTGTAACTTGTTTGACTCTATTGAAGTCATCCTTACCTGGTGGGTGT
GACTACCTATTTACTGGGAGCAGAGATGGCACATTAAAGAGATGGGCATTGGCTGAAGAT
GGTGCCGCCTGTTGTGCTACATTTGAGTCCCATGTTTATTGGGTAAATGATGCTGTTCTT
ACGGGCAATAACACATTGGTTTCATGCTCCTCAGACACCACTGTCAAGGTATGGAATGGC
TTATCTGAGGGATCTTGTATCAGGACACTTCGTCGGCACTCTGATTATGTCACTTGCCTT
GCTTCAGCTGACAAAAATAGCAATGTTGTTACATCTGCTGGGCTTGGTGGTGAGGTTTTC
ATATGGGACATTGAAGGCGCACTTGCCCCAACATCTAAGTCAAGTGATGCAACTGAGGAA
GATTATTCAAATGGTGTCAGTGGTTCAGGAAGTTCATTACCCATTACAGGCATCCATAAA
TCGAGCAACACCATTTCCTTGCACACCCAGTCTCAAGGATATATTCCTGTGTCTGCAAAA
GGCCGTAAGGAGTCAGTATATGCATTGGCAATGAATGAGAGCGGATCCCTTCTTGTTTCT
GGTGGAACTGAGAAGGTTGTTCGTGTCTGGGATCCAAGAACCGGTTCGAAGAACATGAAG
CTTAAAGGTCATACAGATAATATTAGGGCACTACTTCTTGATTCTACTGGCAGGTTCTGC
TTATCTGGGTCTTCTGATTCCATGATTAGATTGTGGGATCTGGGTCAGCAGCGGTGTGTC
CATTCCTATGCTGTGCATACTGATTCTGTATGGGCACTTGCTAGTACTCCAACATTTAGT
CATGTTTATAGTGGTGGAAGAGATCTCTCTCTAAGTGGACTCCTAAAACTTATCCAGCAT
TTGTACCTAACAGATTTGGCAACAAGGGAAAGTATCTTGCTTTATACAAAGGAACACCCT
ATTTTGCAGTTAGCATTACACGGTGACAGCATGTGGGTGGCCACAACTGATTCTTCGGTA
CATAAGTGGCCAGCAGAAGGGCGTAATCCCCAGAAGGTTTTCGAAAGAGGGGGTTCGTTC
TTGGCTGGAAACTTGTCTTTTTCCAGGGCAAGGGTTTCATTAGAGGGATCTACGCCTGTA
CCTGTCTATGAAGAACCTTCATTTAGCATTTCTGGAACCCCAGGAATAGTGCAGTATGAG
ATTTTAAATAACAGAAGGCATGTCCTGACCAAGGATACTGCTGGTACAGTTAAGTTGTGG
GAGATCACAAGAGGGGCTGTAATTCAAAACTACAGAGAGGTTTCATTTGACAAGAAAAAG
GAAGAATTATTTGAGATGGTAAGCATCCCTGCATGGTTCACCATGGACACTAGGCTGGGA
AGCCTGGCTGTACATTTGGATACTCCACAATGCTTTTCTGCTGAGATGTACTCTGCTGAC
CTTAACATCCCCGGGAAACCTGAAGATGACAAGGTTAATTTGGCACGAGAAACACTTAAA
GGGCTGTTGGTGCATGGGTTAATCAAAAGAAGGCAGAAATTTGGATCTCAACCGTCAAGC
AATGGAGAAGTCCCATCTGGAAAAGATGTATCTGTAAGGATTTTGGCTGCATCTAGAGTG
GAAGTAGACAGTGGTGCTGATAACGATTCTGCTGTATTTCCCCCCTTTGAATTTTCAGCA
GTATCTCCTTCATCTATCGTGACTGAGGGCTCTCAAAGTGGTCCTTGGAGGAAAAAGATC
ACAGACTTAGATGGAACTGAAGACGAGAAGGACATGCCTTGGTGGGTTATAGACTGTGTG
ATGAACAATCGGCTGCCTCCCAGAGAAAATACCAAACGTAGCTTTTATTTGCATCCATGT
GAAGGTTCTACATTCCAGATCCTTACCCAAGGCAAGCTGAGTGCACCTAGCATATTAAGA
ATTCACAAAGTTATCAATTATGTCATAGAAAAGATGGTTCTTGACAAGCCTTTGGATAGT
ATTAACTCGGATGGGAGTTTTACTTCTGGAATGCATGGAGTTACTGGAGGAGATGGCTCA
TTCCGGACTGGGCCGAAACCTTGGCAAAAGCTTAAGCCATCTATAGAGATTCTGTGCAAT
AACCAGGTTTTATCTCCTGATATGAGCTTAGCAACTGTCCGGGCCTATACATGGAAGAAA
CCGGAAGATCTTGTACTTAATTACCGTGTGTTGCAGAGCAAGTGA

Peptide Sequence

PEP ID

XP_016451499.1
PEP Infomation

PREDICTED: WD repeat-containing protein 48-like [Nicotiana tabacum]
Sequence

MNQKKKVRMPCFTFGASVGEEHYAGVTCLTLLKSSLPGGCDYLFTGSRDGTLKRWALAED
GAACCATFESHVYWVNDAVLTGNNTLVSCSSDTTVKVWNGLSEGSCIRTLRRHSDYVTCL
ASADKNSNVVTSAGLGGEVFIWDIEGALAPTSKSSDATEEDYSNGVSGSGSSLPITGIHK
SSNTISLHTQSQGYIPVSAKGRKESVYALAMNESGSLLVSGGTEKVVRVWDPRTGSKNMK
LKGHTDNIRALLLDSTGRFCLSGSSDSMIRLWDLGQQRCVHSYAVHTDSVWALASTPTFS
HVYSGGRDLSLSGLLKLIQHLYLTDLATRESILLYTKEHPILQLALHGDSMWVATTDSSV
HKWPAEGRNPQKVFERGGSFLAGNLSFSRARVSLEGSTPVPVYEEPSFSISGTPGIVQYE
ILNNRRHVLTKDTAGTVKLWEITRGAVIQNYREVSFDKKKEELFEMVSIPAWFTMDTRLG
SLAVHLDTPQCFSAEMYSADLNIPGKPEDDKVNLARETLKGLLVHGLIKRRQKFGSQPSS
NGEVPSGKDVSVRILAASRVEVDSGADNDSAVFPPFEFSAVSPSSIVTEGSQSGPWRKKI
TDLDGTEDEKDMPWWVIDCVMNNRLPPRENTKRSFYLHPCEGSTFQILTQGKLSAPSILR
IHKVINYVIEKMVLDKPLDSINSDGSFTSGMHGVTGGDGSFRTGPKPWQKLKPSIEILCN
NQVLSPDMSLATVRAYTWKKPEDLVLNYRVLQSK

Transcript Sequence

Gene sequence data has not been registered.